Visualizing lattice vibration information from phonon dispersion to atoms (For GPUMD)

Overview

Phonon-Vibration-Viewer (For GPUMD)

Visualizing lattice vibration information from phonon dispersion for primitive atoms.

In this tutorial, we will introduce how to obtain the lattice vibration information and visualize it onto atoms by using GPUMD and OVITO.

We will use a novel fivefive twinned diamond nanowire (5FT-DNWs) stucture as an example (Liang 2021).

The tutorial is jupyter notebook, hope one can enjoy it.

Example:

References

In the end, we will reached the desired goal.

Owner
Liangting
Ph.D. candidate; Thermal transfer; Two-dimensional materials; Computing physics
Liangting
Tianshou - An elegant PyTorch deep reinforcement learning library.

Tianshou (天授) is a reinforcement learning platform based on pure PyTorch. Unlike existing reinforcement learning libraries, which are mainly based on

Tsinghua Machine Learning Group 5.5k Jan 05, 2023
Predict halo masses from simulations via graph neural networks

HaloGraphNet Predict halo masses from simulations via Graph Neural Networks. Given a dark matter halo and its galaxies, creates a graph with informati

Pablo Villanueva Domingo 20 Nov 15, 2022
On Out-of-distribution Detection with Energy-based Models

On Out-of-distribution Detection with Energy-based Models This repository contains the code for the experiments conducted in the paper On Out-of-distr

Sven 19 Aug 07, 2022
This repository contains source code for the Situated Interactive Language Grounding (SILG) benchmark

SILG This repository contains source code for the Situated Interactive Language Grounding (SILG) benchmark. If you find this work helpful, please cons

Victor Zhong 17 Nov 27, 2022
GPT-Code-Clippy (GPT-CC) is an open source version of GitHub Copilot

GPT-Code-Clippy (GPT-CC) is an open source version of GitHub Copilot, a language model -- based on GPT-3, called GPT-Codex -- that is fine-tuned on publicly available code from GitHub.

2.3k Jan 09, 2023
Deep Learning segmentation suite designed for 2D microscopy image segmentation

Deep Learning segmentation suite dessigned for 2D microscopy image segmentation This repository provides researchers with a code to try different enco

7 Nov 03, 2022
Face Depixelizer based on "PULSE: Self-Supervised Photo Upsampling via Latent Space Exploration of Generative Models" repository.

NOTE We have noticed a lot of concern that PULSE will be used to identify individuals whose faces have been blurred out. We want to emphasize that thi

Denis Malimonov 2k Dec 29, 2022
Code for "Unsupervised Source Separation via Bayesian inference in the latent domain"

LQVAE-separation Code for "Unsupervised Source Separation via Bayesian inference in the latent domain" Paper Samples GT Compressed Separated Drums GT

Michele Mancusi 30 Oct 25, 2022
On the Limits of Pseudo Ground Truth in Visual Camera Re-Localization

On the Limits of Pseudo Ground Truth in Visual Camera Re-Localization This repository contains the evaluation code and alternative pseudo ground truth

Torsten Sattler 36 Dec 22, 2022
Spectralformer: Rethinking hyperspectral image classification with transformers

Spectralformer: Rethinking hyperspectral image classification with transformers Danfeng Hong, Zhu Han, Jing Yao, Lianru Gao, Bing Zhang, Antonio Plaza

Danfeng Hong 102 Dec 29, 2022
Scenic: A Jax Library for Computer Vision and Beyond

Scenic Scenic is a codebase with a focus on research around attention-based models for computer vision. Scenic has been successfully used to develop c

Google Research 1.6k Dec 27, 2022
A practical ML pipeline for data labeling with experiment tracking using DVC.

Auto Label Pipeline A practical ML pipeline for data labeling with experiment tracking using DVC Goals: Demonstrate reproducible ML Use DVC to build a

Todd Cook 4 Mar 08, 2022
Official code for the ICCV 2021 paper "DECA: Deep viewpoint-Equivariant human pose estimation using Capsule Autoencoders"

DECA Official code for the ICCV 2021 paper "DECA: Deep viewpoint-Equivariant human pose estimation using Capsule Autoencoders". All the code is writte

23 Dec 01, 2022
Aspect-Sentiment-Multiple-Opinion Triplet Extraction (NLPCC 2021)

The code and data for the paper "Aspect-Sentiment-Multiple-Opinion Triplet Extraction" Requirements Python 3.6.8 torch==1.2.0 pytorch-transformers==1.

慢半拍 5 Jul 02, 2022
Code for the paper: Adversarial Training Against Location-Optimized Adversarial Patches. ECCV-W 2020.

Adversarial Training Against Location-Optimized Adversarial Patches arXiv | Paper | Code | Video | Slides Code for the paper: Sukrut Rao, David Stutz,

Sukrut Rao 32 Dec 13, 2022
VisualGPT: Data-efficient Adaptation of Pretrained Language Models for Image Captioning

VisualGPT Our Paper VisualGPT: Data-efficient Adaptation of Pretrained Language Models for Image Captioning Main Architecture of Our VisualGPT Downloa

Vision CAIR Research Group, KAUST 140 Dec 28, 2022
Dynamica causal Bayesian optimisation

Dynamic Causal Bayesian Optimization This is a Python implementation of Dynamic Causal Bayesian Optimization as presented at NeurIPS 2021. Abstract Th

nd308 18 Nov 22, 2022
Unofficial Implementation of MLP-Mixer, Image Classification Model

MLP-Mixer Unoffical Implementation of MLP-Mixer, easy to use with terminal. Train and test easly. https://arxiv.org/abs/2105.01601 MLP-Mixer is an arc

Oğuzhan Ercan 6 Dec 05, 2022
A curated list of awesome open source libraries to deploy, monitor, version and scale your machine learning

Awesome production machine learning This repository contains a curated list of awesome open source libraries that will help you deploy, monitor, versi

The Institute for Ethical Machine Learning 12.9k Jan 04, 2023
A simple Tensorflow based library for deep and/or denoising AutoEncoder.

libsdae - deep-Autoencoder & denoising autoencoder A simple Tensorflow based library for Deep autoencoder and denoising AE. Library follows sklearn st

Rajarshee Mitra 147 Nov 18, 2022