Napari plugin for iteratively improving 3D instance segmentation of cells (u-net x watershed)

Last update: May 16, 2022

Related tags

Image Processing iterseg

Overview

iterseg

napari plugin for iteratively improving unet-watershed segmentation

This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Installation

You can install iterseg via pip:

pip install iterseg

To install latest development version :

pip install git+https://github.com/abigailmcgovern/iterseg.git

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the BSD-3 license, "iterseg" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

Owner

Abigail McGovern

PhD Student or 18th Century porcelain cabbage art.

GitHub Repository

The following program is used to swap the faces from two images.

Face-Swapping The following program is used to swap the faces from two images. In today's world deep fake technology has become really popular . As a

1 Jan 19, 2022

Convert any image into greyscale ASCII art.

Image-to-ASCII Convert any image into greyscale ASCII art.

12 Jan 15, 2022

A Icon Maker GUI Made - Convert your image into icon ( .ico format ).

Icon-Maker-GUI A Icon Maker GUI Made Using Python 3.9.0 . It will take any image and convert it to ICO file, for web site favicon or Windows applicati

12 Dec 15, 2021

A scalable implementation of WobblyStitcher for 3D microscopy images

WobblyStitcher Introduction A scalable implementation of WobblyStitcher Dependencies $ python -m pip install numpy scikit-image Visualization ImageJ

7 Jul 25, 2022

Detecting haze image with hazer.

hazer-py Detecting haze image with hazer. What is hazer Hazer is a lib for getting "haze degree". This repository is python version of hazer: https://

2 Dec 27, 2021

A large-scale dataset of both raw MRI measurements and clinical MRI images

fastMRI is a collaborative research project from Facebook AI Research (FAIR) and NYU Langone Health to investigate the use of AI to make MRI scans faster. NYU Langone Health has released fully anonym

907 Jan 04, 2023

A simple plugin to view APR images in napari

napari-apr-viewer A simple plugin to view APR images in napari This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-

5 Jan 24, 2022

Python binding to Skia Graphics Library

Skia python binding Python binding to Skia Graphics Library. Binding based on pybind11. Currently, the binding is under active development. Install Bi

170 Jan 06, 2023

Craft PNG files that appear completely different in Apple software

Ambiguous PNG Packer Craft PNG files that appear completely different in Apple software

1k Dec 29, 2022

⚡ZenGL is a minimalist Python module providing exactly one way to render scenes with OpenGL.

ZenGL is a minimalist Python module providing exactly one way to render scenes with OpenGL.

133 Dec 17, 2022

missing-pixel-filler is a python package that, given images that may contain missing data regions (like satellite imagery with swath gaps), returns these images with the regions filled.

Missing Pixel Filler This is the official code repository for the Missing Pixel Filler by SpaceML. missing-pixel-filler is a python package that, give

11 Jul 19, 2022