Graph Augmentation

Graph augmentation/self-supervision/etc.

Algorithms

• gcn
• gcn+virtual node
• gin
• gin+virtual node
• PNA
• GraphTrans

Augmentation methods

• None
• FLAG
• Augmentation

Installation

To setup the Python environment, please install conda first.

All the required environments are in setup.sh.

How to Run

To run experiments:

CUDA_VISIBLE_DEVICES=0 python main.py \
    --configs configs/code2/gcn-virtual/baseline+run1+seed.yml

# Or to use slurm
sbatch ./slurm-run.sh configs/code2/gcn-virtual/baseline+run1+seed.yml

Exps

GNN-Transformer

CUDA_VISIBLE_DEVICES=0 python main.py \
    --configs configs/code2/gnn-transformer/JK=cat/pooling=cls+norm_input.yml