MRI reconstruction (e.g., QSM) using deep learning methods

Overview

deepMRI: Deep learning methods for MRI

Authors: Yang Gao, Hongfu Sun

  • This repo is devloped based on Pytorch (1.8 or later) and matlab (R2019a or later).

  • The codes in this repo were tested on Centos 7.8 with Nvdia Tesla V100 and macos12.0.1/win10/ubuntu19.10 with GTX 1060

     

Projects

xQSM for QSM dipole inversion

DCRnet for QSM and R2* acceleration

iQSM for single-step instant QSM

     

xQSM for QSM dipole inversion

xQSM: quantitative susceptibility mapping with octave convolutional and noise-regularized neural networks

Whole Framework

source code (github)   |   arXiv (pre-print)   |   NMR in Biomed (full paper)

     

DCRNet for QSM and R2* acceleration

Accelerating quantitative susceptibility and R2* mapping using incoherent undersampling and deep neural network reconstruction

source code (github)   |   arXiv (pre-print)   |   NeuroImage (full paper)

Whole Framework

     

iQSM for single-step instant QSM

Instant tissue field and magnetic susceptibility mapping from MRI raw phase using Laplacian enabled deep neural networks

source code (github)   |   arXiv (pre-print)

Whole Framework

top

Owner
Hongfu Sun
MRI and Deep Learning researcher
Hongfu Sun
This is the official code of our paper "Diversity-based Trajectory and Goal Selection with Hindsight Experience Relay" (PRICAI 2021)

Diversity-based Trajectory and Goal Selection with Hindsight Experience Replay This is the official implementation of our paper "Diversity-based Traje

Tianhong Dai 6 Jul 18, 2022
Generic ecosystem for feature extraction from aerial and satellite imagery

Note: Robosat is neither maintained not actively developed any longer by Mapbox. See this issue. The main developers (@daniel-j-h, @bkowshik) are no l

Mapbox 1.9k Jan 06, 2023
Unsupervised Image to Image Translation with Generative Adversarial Networks

Unsupervised Image to Image Translation with Generative Adversarial Networks Paper: Unsupervised Image to Image Translation with Generative Adversaria

Hao 71 Oct 30, 2022
Self-Learned Video Rain Streak Removal: When Cyclic Consistency Meets Temporal Correspondence

In this paper, we address the problem of rain streaks removal in video by developing a self-learned rain streak removal method, which does not require any clean groundtruth images in the training pro

Yang Wenhan 44 Dec 06, 2022
Deep Learning pipeline for motor-imagery classification.

BCI-ToolBox 1. Introduction BCI-ToolBox is deep learning pipeline for motor-imagery classification. This repo contains five models: ShallowConvNet, De

DongHee 18 Oct 31, 2022
Official implementation of "OpenPifPaf: Composite Fields for Semantic Keypoint Detection and Spatio-Temporal Association" in PyTorch.

openpifpaf Continuously tested on Linux, MacOS and Windows: New 2021 paper: OpenPifPaf: Composite Fields for Semantic Keypoint Detection and Spatio-Te

VITA lab at EPFL 50 Dec 29, 2022
Python program that works as a contact list

Lista de Contatos Programa em Python que funciona como uma lista de contatos. Features Adicionar novo contato Remover contato Atualizar contato Pesqui

Victor B. Lino 3 Dec 16, 2021
Safe Policy Optimization with Local Features

Safe Policy Optimization with Local Feature (SPO-LF) This is the source-code for implementing the algorithms in the paper "Safe Policy Optimization wi

Akifumi Wachi 6 Jun 05, 2022
Mmrotate - OpenMMLab Rotated Object Detection Benchmark

OpenMMLab website HOT OpenMMLab platform TRY IT OUT 📘 Documentation | 🛠️ Insta

OpenMMLab 1.2k Jan 04, 2023
Static-test - A playground to play with ideas related to testing the comparability of the code

Static test playground ⚠️ The code is just an experiment. Compiles and runs on U

Igor Bogoslavskyi 4 Feb 18, 2022
RL-driven agent playing tic-tac-toe on starknet against challengers.

tictactoe-on-starknet RL-driven agent playing tic-tac-toe on starknet against challengers. GUI reference: https://pythonguides.com/create-a-game-using

21 Jul 30, 2022
An unofficial PyTorch implementation of a federated learning algorithm, FedAvg.

Federated Averaging (FedAvg) in PyTorch An unofficial implementation of FederatedAveraging (or FedAvg) algorithm proposed in the paper Communication-E

Seok-Ju Hahn 123 Jan 06, 2023
Face Mask Detection system based on computer vision and deep learning using OpenCV and Tensorflow/Keras

Face Mask Detection Face Mask Detection System built with OpenCV, Keras/TensorFlow using Deep Learning and Computer Vision concepts in order to detect

Chandrika Deb 1.4k Jan 03, 2023
People log into different sites every day to get information and browse through these sites one by one

HyperLink People log into different sites every day to get information and browse through these sites one by one. And they are exposed to advertisemen

0 Feb 17, 2022
Pytorch implementation of NEGEV method. Paper: "Negative Evidence Matters in Interpretable Histology Image Classification".

Pytorch 1.10.0 code for: Negative Evidence Matters in Interpretable Histology Image Classification (https://arxiv. org/abs/xxxx.xxxxx) Citation: @arti

Soufiane Belharbi 4 Dec 01, 2022
Real-time analysis of intracranial neurophysiology recordings.

py_neuromodulation Click this button to run the "Tutorial ML with py_neuro" notebooks: The py_neuromodulation toolbox allows for real time capable pro

Interventional Cognitive Neuromodulation - Neumann Lab Berlin 15 Nov 03, 2022
OptaPlanner wrappers for Python. Currently significantly slower than OptaPlanner in Java or Kotlin.

OptaPy is an AI constraint solver for Python to optimize the Vehicle Routing Problem, Employee Rostering, Maintenance Scheduling, Task Assignment, School Timetabling, Cloud Optimization, Conference S

OptaPy 211 Jan 02, 2023
Implementation of "Efficient Regional Memory Network for Video Object Segmentation" (Xie et al., CVPR 2021).

RMNet This repository contains the source code for the paper Efficient Regional Memory Network for Video Object Segmentation. Cite this work @inprocee

Haozhe Xie 76 Dec 14, 2022
Implementing Vision Transformer (ViT) in PyTorch

Lightning-Hydra-Template A clean and scalable template to kickstart your deep learning project 🚀 ⚡ 🔥 Click on Use this template to initialize new re

2 Dec 24, 2021
Code for "Adversarial Training for a Hybrid Approach to Aspect-Based Sentiment Analysis

HAABSAStar Code for "Adversarial Training for a Hybrid Approach to Aspect-Based Sentiment Analysis". This project builds on the code from https://gith

1 Sep 14, 2020