Statistical Rethinking course winter 2022

Overview

Statistical Rethinking (2022 Edition)

Instructor: Richard McElreath

Lectures: Uploaded <Playlist> and pre-recorded, two per week

Discussion: Online, Fridays 3pm-4pm Central European Time

Purpose

This course teaches data analysis, but it focuses on scientific models first. The unfortunate truth about data is that nothing much can be done with it, until we say what caused it. We will prioritize conceptual, causal models and precise questions about those models. We will use Bayesian data analysis to connect scientific models to evidence. And we will learn powerful computational tools for coping with high-dimension, imperfect data of the kind that biologists and social scientists face.

Format

Online, flipped instruction. The lectures are pre-recorded. We'll meet online once a week for an hour to work through the solutions to the assigned problems.

We'll use the 2nd edition of my book, <Statistical Rethinking>. I'll provide a PDF of the book to enrolled students.

Registration: Please sign up via <[COURSE IS FULL SORRY]>. I've also set aside 100 audit tickets at the same link, for people who want to participate, but who don't need graded work and course credit.

Calendar & Topical Outline

There are 10 weeks of instruction. Links to lecture recordings will appear in this table. Weekly problem sets are assigned on Fridays and due the next Friday, when we discuss the solutions in the weekly online meeting.

Lecture playlist on Youtube: <Statistical Rethinking 2022>

Week ## Meeting date Reading Lectures
Week 01 07 January Chapters 1, 2 and 3 [1] <The Golem of Prague> <(Slides)>
[2] <Bayesian Inference> <(Slides)>
Week 02 14 January Chapters 4 and 5 [3] <Basic Regression> <(Slides)>
[4] <Categories & Curves> <(Slides)>
Week 03 21 January Chapters 5 and 6 [5] <Elemental Confounds> <(Slides)>
[6] <Good & Bad Controls> <(Slides)>
Week 04 28 January Chapters 7 and 8 [7] Overfitting
[8] Interactions
Week 05 04 February Chapters 9, 10 and 11 [9] Markov chain Monte Carlo
[10] Binomial GLMs
Week 06 11 February Chapters 11 and 12 [11] Poisson GLMs
[12] Ordered Categories
Week 07 18 February Chapter 13 [13] Multilevel Models
[14] Multi-Multilevel Models
Week 08 25 February Chapter 14 [15] Varying Slopes
[16] Gaussian Processes
Week 09 04 March Chapter 15 [17] Measurement Error
[18] Missing Data
Week 10 11 March Chapters 16 and 17 [19] Beyond GLMs: State-space Models, ODEs
[20] Horoscopes

Coding

This course involves a lot of scripting. Students can engage with the material using either the original R code examples or one of several conversions to other computing environments. The conversions are not always exact, but they are rather complete. Each option is listed below.

Original R Flavor

For those who want to use the original R code examples in the print book, you need to install the rethinking R package. The code is all on github https://github.com/rmcelreath/rethinking/ and there are additional details about the package there, including information about using the more-up-to-date cmdstanr instead of rstan as the underlying MCMC engine.

R + Tidyverse + ggplot2 + brms

The <Tidyverse/brms> conversion is very high quality and complete through Chapter 14.

Python and PyMC3

The <Python/PyMC3> conversion is quite complete.

Julia and Turing

The <Julia/Turing> conversion is not as complete, but is growing fast and presents the Rethinking examples in multiple Julia engines, including the great <TuringLang>.

Other

The are several other conversions. See the full list at https://xcelab.net/rm/statistical-rethinking/.

Homework and solutions

I will also post problem sets and solutions. Check the folders at the top of the repository.

Owner
Richard McElreath
Richard McElreath
bigdata_analyse 大数据分析项目

bigdata_analyse 大数据分析项目 wish 采用不同的技术栈,通过对不同行业的数据集进行分析,期望达到以下目标: 了解不同领域的业务分析指标 深化数据处理、数据分析、数据可视化能力 增加大数据批处理、流处理的实践经验 增加数据挖掘的实践经验

Way 2.4k Dec 30, 2022
An experimental project I'm undertaking for the sole purpose of increasing my Python knowledge

5ePy is an experimental project I'm undertaking for the sole purpose of increasing my Python knowledge. #Goals Goal: Create a working, albeit lightwei

Hayden Covington 1 Nov 24, 2021
Instant search for and access to many datasets in Pyspark.

SparkDataset Provides instant access to many datasets right from Pyspark (in Spark DataFrame structure). Drop a star if you like the project. 😃 Motiv

Souvik Pratiher 31 Dec 16, 2022
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis. You write a high level configuration file specifying your in

Blue Collar Bioinformatics 917 Jan 03, 2023
Binance Kline Data With Python

Binance Kline Data by seunghan(gingerthorp) reference https://github.com/binance/binance-public-data/ All intervals are supported: 1m, 3m, 5m, 15m, 30

shquant 5 Jul 13, 2022
Tools for the analysis, simulation, and presentation of Lorentz TEM data.

ltempy ltempy is a set of tools for Lorentz TEM data analysis, simulation, and presentation. Features Single Image Transport of Intensity Equation (SI

McMorran Lab 1 Dec 26, 2022
Data cleaning tools for Business analysis

Datacleaning datacleaning tools for Business analysis This program is made for Vicky's work. You can use it, too. 数据清洗 该数据清洗工具是为了商业分析 这个程序是为了Vicky的工作而

Lin Jian 3 Nov 16, 2021
CleanX is an open source python library for exploring, cleaning and augmenting large datasets of X-rays, or certain other types of radiological images.

cleanX CleanX is an open source python library for exploring, cleaning and augmenting large datasets of X-rays, or certain other types of radiological

Candace Makeda Moore, MD 20 Jan 05, 2023
Single-Cell Analysis in Python. Scales to >1M cells.

Scanpy – Single-Cell Analysis in Python Scanpy is a scalable toolkit for analyzing single-cell gene expression data built jointly with anndata. It inc

Theis Lab 1.4k Jan 05, 2023
Flood modeling by 2D shallow water equation

hydraulicmodel Flood modeling by 2D shallow water equation. Refer to Hunter et al (2005), Bates et al. (2010). Diffusive wave approximation Local iner

6 Nov 30, 2022
Pizza Orders Data Pipeline Usecase Solved by SQL, Sqoop, HDFS, Hive, Airflow.

PizzaOrders_DataPipeline There is a Tony who is owning a New Pizza shop. He knew that pizza alone was not going to help him get seed funding to expand

Melwin Varghese P 4 Jun 05, 2022
A data parser for the internal syncing data format used by Fog of World.

A data parser for the internal syncing data format used by Fog of World. The parser is not designed to be a well-coded library with good performance, it is more like a demo for showing the data struc

Zed(Zijun) Chen 40 Dec 12, 2022
A Python package for Bayesian forecasting with object-oriented design and probabilistic models under the hood.

Disclaimer This project is stable and being incubated for long-term support. It may contain new experimental code, for which APIs are subject to chang

Uber Open Source 1.6k Dec 29, 2022
Evaluation of a Monocular Eye Tracking Set-Up

Evaluation of a Monocular Eye Tracking Set-Up As part of my master thesis, I implemented a new state-of-the-art model that is based on the work of Che

Pascal 19 Dec 17, 2022
fds is a tool for Data Scientists made by DAGsHub to version control data and code at once.

Fast Data Science, AKA fds, is a CLI for Data Scientists to version control data and code at once, by conveniently wrapping git and dvc

DAGsHub 359 Dec 22, 2022
Full ELT process on GCP environment.

Rent Houses Germany - GCP Pipeline Project: The goal of the project is to extract data about house rentals in Germany, store, process and analyze it u

Felipe Demenech Vasconcelos 2 Jan 20, 2022
A forecasting system dedicated to smart city data

smart-city-predictions System prognostyczny dedykowany dla danych inteligentnych miast Praca inżynierska realizowana przez Michała Stawikowskiego and

Kevin Lai 1 Nov 08, 2021
Python beta calculator that retrieves stock and market data and provides linear regressions.

Stock and Index Beta Calculator Python script that calculates the beta (β) of a stock against the chosen index. The script retrieves the data and resa

sammuhrai 4 Jul 29, 2022
Cleaning and analysing aggregated UK political polling data.

Analysing aggregated UK polling data The tweet collection & storage pipeline used in email-service is used to also collect tweets from @britainelects.

Ajay Pethani 0 Dec 22, 2021
Using Python to scrape some basic player information from www.premierleague.com and then use Pandas to analyse said data.

PremiershipPlayerAnalysis Using Python to scrape some basic player information from www.premierleague.com and then use Pandas to analyse said data. No

5 Sep 06, 2021