Automated moth pictures for biodiversity research

Related tags

Miscellaneousmothpi
Overview

MothPi

Installation

System packages

Required packages:

sudo apt-get update
sudo apt-get -y upgrade && sudo apt autoremove

sudo apt install -y python3-setuptools python3-dev python3-pip libsystemd-dev python3-gphoto2 python3-gpiozero wiringpi python3-systemd gphoto2 python3-yaml
sudo pip3 install -r requirements.txt

Correct time stamps

Preserve timing information as well as possible:

  • Transport the camera with a battery, as it has an internal clock with limited power capacity; and check the correcttime in the camera when setting up; pictures then will have the correct timestamp.
  • If the Raspberry Pi will be without internet connection, install fake-hwclock or optionally install a hardware clock.
  • If it will have internet connection: Make sure that the systemd service systemd-timesyncd.service is enabled and started time zone is set correctly:
systemctl enable --now systemd-timesyncd.service
timedatectl set-ntp true 
timedatectl set-timezone "Europe/Berlin" # or any other timezone

Mothpi service

Also, the Mothpi program will run as user, so make sure that automatic start-up of user instances is activated:

loginctl enable-linger pi

Mothpi installation

The main Mothpi programm can be downloaded from this git repository.

git clone https://github.com/lumaku/mothpi ~/mothpi

If you use a development version and need an access token, set up an access token in Settings->Access Tokens, then use it to access this Mothpi repository.

MOTHPI_TOKEN=<token>
git clone https://gitlab-ci-token:${MOTHPI_TOKEN}@gitlab.lrz.de/visammod/mothpi ~/mothpi

The included script automates the updating process as well as other tasks.

Camera setup

  • Switch the camera "ON".
  • Make sure that PC connection over USB is activated. This can be verified by connecting it with USB cable to the Raspberry Pi. Then, the camera displays a "waiting for connection" message.
  • To reduce power usage, switch off the display setting "Sucher" in the menu for "Display/Sucher" on Page 3 of the Gear ⚙️ page. (Sony Alpha 6000)
  • Don't forget to activate the flash by pressing the flash button.

Run Mothpi

Start with mothpi.sh that provides a boilerplate for mothpi, including functions for:

  • automatic updates,
  • systemd services,
  • reverse ssh tunnel to the main server and
  • a pictures uploader.

Initialize with:

./mothpi.sh init

this will copy and enable systemd services and set up systemd service variables.

The core program that takes pictures is in mothpi/mothpy.py.

Mothpi App

The web app included in mothpi/app.py provides a web interface to check its status and change the configuration. It can be accessed on Port 8000. The IP address of the device is displayed on the e-Paper display, if available.

Example configuration page:

Configuration page of the Mothpi App

Mothpi default configuration

The mothpi configuration file will be saved in $HOME/.mothpi. Pictures are saved in /home/pi/pics/ and will be moved over to the server in regular intervals.

Periodic restarts are disabled by default, but can be activated over the configuration file.

Owner
Ludwig Kürzinger
Ludwig Kürzinger
Clock in automatically in SCU.

auto_clock_in Clock in automatically in SCU. Features send logs to Telegram bot How to use? pip install -r requirements.txt () edit user_list, token_A

2 Dec 13, 2021
This is a simple web interface for SimplyTranslate

SimplyTranslate Web This is a simple web interface for SimplyTranslate List of Instances You can find a list of instances here: SimplyTranslate Projec

4 Dec 14, 2022
An awesome script to convert the University Of Oviedo web calendar to Google or Outlook calendars.

autoUniCalendar Un script en Python para convertir el calendario de la intranet de la Universidad de Oviedo en un calendario de Outlook o Google Calen

Bimo99B9 14 Sep 28, 2022
External Network Pentest Automation using Shodan API and other tools.

Chopin External Network Pentest Automation using Shodan API and other tools. Workflow Input a file containing CIDR ranges. Converts CIDR ranges to ind

Aditya Dixit 9 Aug 04, 2022
A simple python script where the user inputs the current ingredients they have in their kitchen into ingredients.txt

A simple python script where the user inputs the current ingredients they have in their kitchen into ingredients.txt and then runs the main.py script, and it will output what recipes can be created b

Jordan Leich 3 Nov 02, 2022
Coderslab Workshop Projects

Workshop Coderslab workshop projects that include: Guessing Game Lotto simulator Guessing Game vol.2 Guessing Game vol.3 Dice 2001 Game Technologies P

Szymon Połczyński 1 Nov 06, 2021
General tricks that may help you find bad, or noisy, labels in your dataset

doubtlab A lab for bad labels. Warning still in progress. This repository contains general tricks that may help you find bad, or noisy, labels in your

vincent d warmerdam 449 Dec 26, 2022
Myrepo - A tool to create your own Arch Linux repository

myrepo A (experimental) tool to create your own Arch Linux repository Example We

Anton Hvornum 5 Feb 19, 2022
It is a Blender Tool which can convert the Object Data Attributes in face corner to the UVs or Vertex Color.

Blender_ObjectDataAttributesConvertTool It is a Blender Tool which can convert the Object Data Attributes in face corner to the UVs or Vertex Color. D

Takeshi Chō 2 Jan 08, 2022
Material de apoio da oficina de SAST apresentada pelo CAIS no Webinar de 28/05/21.

CAIS-CAIS Conjunto de Aplicações Intencionamente Sem-Vergonha do CAIS Material didático do Webinar "EP1. Oficina - Práticas de análise estática de cód

Fausto Filho 14 Jul 25, 2022
A domonic-like wrapper around selectolax

A domonic-like wrapper around selectolax

byteface 3 Jun 23, 2022
Encode stuff with ducks!

Duckify Encoder Usage Download main.py and run it. main.py has an encoded version in encoded_main.py.txt. As A Module Download the duckify folder (or

Jeremiah 2 Nov 15, 2021
Strawberry Benchmark With Python

Strawberry benchmarks these benchmarks have been made to compare the performance of dataloaders and joined database queries. How to use You can run th

Doctor 4 Feb 23, 2022
Sigma coding youtube - This is a collection of all the code that can be found on my YouTube channel Sigma Coding.

Sigma Coding Tutorials & Resources YouTube • Facebook Support Sigma Coding Patreon • GitHub Sponsor • Shop Amazon Table of Contents Overview Topics Re

Alex Reed 927 Jan 08, 2023
SpaCy3Urdu: run command to setup assets(dataset from UD)

Project setup run command to setup assets(dataset from UD) spacy project assets It uses project.yml file and download the data from UD GitHub reposito

Muhammad Irfan 1 Dec 14, 2021
A Tandy Color Computer 1, 2, and 3 assembler written in Python

CoCo Assembler and File Utility Table of Contents What is it? Requirements License Installing Assembler Assembler Usage Input File Format Print Symbol

Craig Thomas 16 Nov 03, 2022
A simple hash system.

PBH-Hash-System A simple hash system. Usage You could use it like this: from pbh import pbh print(pbh("Hey", True)) Output: 2feae2471698cfcdcbd6b98ca

Karim 3 Mar 24, 2022
HSPyLib is a Python library that will elevate your experience to another level.

HomeSetup Python Library - HSPyLib Your mature python application HSPyLib is a Python library that will elevate your experience to another level. It r

Hugo Saporetti Junior 4 Dec 14, 2022
GitHub saver for stargazers, forks, repos

GitHub backup repositories Save your repos and list of stargazers & list of forks for them. Pure python3 and git with no dependencies to install. GitH

Alexander Kapitanov 23 Aug 21, 2022
Stori QA Automation Challenge

Stori-QA-Automation-Challenge This is the repository is created for the Stori QA Intern Automation Engineer Challenge! In this you can find the Requir

Daniel Castañeda 0 Feb 20, 2022