Mixed Transformer UNet for Medical Image Segmentation

Overview

MT-UNet

Update 2022/01/05

By another round of training based on previous weights, our model also achieved a better performance on ACDC (91.61% DSC). We have changed the weight for ACDC to this newest version and you can check it out for yourself. However, previous versions of weights are still available on Google Drive, and you can access them via previous commits.

Update 2022/01/04

We have further trained our MT-UNet and it turns out to have a better result on Synapse with 79.20% DSC. We have changed the public weights of Synapse to this version and will also update the results in our paper.

Update 2022/01/03

It should be mentioned that we are currently conducting some statistical evaluations on our model and these results will be also made public on this site.

  • [Updated] Click here for our weights used on Synapse.

  • [Updated] Click here for our weights used on ACDC. The authors of TransUnet did not provide the split of ACDC dataset. Therefore, we conducted all the ACDC experiments based on our own dataset split.

Update 2021/11/19

  • Thank you for your interest in our work. We have uploaded the code of our MTUNet to help peers conduct further research on it. However, rest of the codes (such as the training and testing codes) are currently not so well organized, and we plan to release them upon paper publication. It also should be noted that they are still avaliable right now with a rough appearance. Please contact us for these codes if you are new to this field or having difficulty in applying our model to your own dataset.

This is the official implementation for our ICASSP2022 paper MIXED TRANSFORMER UNET FOR MEDICAL IMAGE SEGMENTATION

The entire code will be released upon paper publication.

Owner
dotman
Get yourself a cup of tea. ˊ_>ˋ旦
dotman
This repo implements a 3D segmentation task for an airport baggage dataset.

3D CT Scan Segmentation With Occupancy Network This repo implements a 3D superresolution segmentation task for an airport baggage dataset. Our final p

Christoph Reich 2 Mar 28, 2022
Least Square Calibration for Peer Reviews

Least Square Calibration for Peer Reviews Requirements gurobipy - for solving convex programs GPy - for Bayesian baseline numpy pandas To generate p

Sigma <a href=[email protected]"> 1 Nov 01, 2021
A simple python stock Predictor

Python Stock Predictor A simple python stock Predictor Demo Run Locally Clone the project git clone https://github.com/yashraj-n/stock-price-predict

Yashraj narke 5 Nov 29, 2021
TensorFlow implementation of "Variational Inference with Normalizing Flows"

[TensorFlow 2] Variational Inference with Normalizing Flows TensorFlow implementation of "Variational Inference with Normalizing Flows" [1] Concept Co

YeongHyeon Park 7 Jun 08, 2022
Object Depth via Motion and Detection Dataset

ODMD Dataset ODMD is the first dataset for learning Object Depth via Motion and Detection. ODMD training data are configurable and extensible, with ea

Brent Griffin 172 Dec 21, 2022
RoMa: A lightweight library to deal with 3D rotations in PyTorch.

RoMa: A lightweight library to deal with 3D rotations in PyTorch. RoMa (which stands for Rotation Manipulation) provides differentiable mappings betwe

NAVER 90 Dec 27, 2022
A programming language written with python

Kaoft A programming language written with python How to use A simple Hello World: c="Hello World" c Output: "Hello World" Operators: a=12

1 Jan 24, 2022
Code for ICCV 2021 paper: ARAPReg: An As-Rigid-As Possible Regularization Loss for Learning Deformable Shape Generators..

ARAPReg Code for ICCV 2021 paper: ARAPReg: An As-Rigid-As Possible Regularization Loss for Learning Deformable Shape Generators.. Installation The cod

Bo Sun 132 Nov 28, 2022
Implementation of CrossViT: Cross-Attention Multi-Scale Vision Transformer for Image Classification

CrossViT : Cross-Attention Multi-Scale Vision Transformer for Image Classification This is an unofficial PyTorch implementation of CrossViT: Cross-Att

Rishikesh (ऋषिकेश) 103 Nov 25, 2022
Official code for Next Check-ins Prediction via History and Friendship on Location-Based Social Networks (MDM 2018)

MUC Next Check-ins Prediction via History and Friendship on Location-Based Social Networks (MDM 2018) Performance Details for Accuracy: | Dataset

Yijun Su 3 Oct 09, 2022
Image Fusion Transformer

Image-Fusion-Transformer Platform Python 3.7 Pytorch =1.0 Training Dataset MS-COCO 2014 (T.-Y. Lin, M. Maire, S. Belongie, J. Hays, P. Perona, D. Ram

Vibashan VS 68 Dec 23, 2022
DVG-Face: Dual Variational Generation for Heterogeneous Face Recognition, TPAMI 2021

DVG-Face: Dual Variational Generation for HFR This repo is a PyTorch implementation of DVG-Face: Dual Variational Generation for Heterogeneous Face Re

52 Dec 30, 2022
Airborne magnetic data of the Osborne Mine and Lightning Creek sill complex, Australia

Osborne Mine, Australia - Airborne total-field magnetic anomaly This is a section of a survey acquired in 1990 by the Queensland Government, Australia

Fatiando a Terra Datasets 1 Jan 21, 2022
Code for "PV-RAFT: Point-Voxel Correlation Fields for Scene Flow Estimation of Point Clouds", CVPR 2021

PV-RAFT This repository contains the PyTorch implementation for paper "PV-RAFT: Point-Voxel Correlation Fields for Scene Flow Estimation of Point Clou

Yi Wei 43 Dec 05, 2022
source code for 'Finding Valid Adjustments under Non-ignorability with Minimal DAG Knowledge' by A. Shah, K. Shanmugam, K. Ahuja

Source code for "Finding Valid Adjustments under Non-ignorability with Minimal DAG Knowledge" Reference: Abhin Shah, Karthikeyan Shanmugam, Kartik Ahu

Abhin Shah 1 Jun 03, 2022
Autoregressive Models in PyTorch.

Autoregressive This repository contains all the necessary PyTorch code, tailored to my presentation, to train and generate data from WaveNet-like auto

Christoph Heindl 41 Oct 09, 2022
Code repository for the paper "Doubly-Trained Adversarial Data Augmentation for Neural Machine Translation" with instructions to reproduce the results.

Doubly Trained Neural Machine Translation System for Adversarial Attack and Data Augmentation Languages Experimented: Data Overview: Source Target Tra

Steven Tan 1 Aug 18, 2022
The implementation our EMNLP 2021 paper "Enhanced Language Representation with Label Knowledge for Span Extraction".

LEAR The implementation our EMNLP 2021 paper "Enhanced Language Representation with Label Knowledge for Span Extraction". **The code is in the "master

杨攀 93 Jan 07, 2023
Implementation detail for paper "Multi-level colonoscopy malignant tissue detection with adversarial CAC-UNet"

Multi-level-colonoscopy-malignant-tissue-detection-with-adversarial-CAC-UNet Implementation detail for our paper "Multi-level colonoscopy malignant ti

CVSM Group - email: <a href=[email protected]"> 84 Nov 22, 2022
PClean: A Domain-Specific Probabilistic Programming Language for Bayesian Data Cleaning

PClean: A Domain-Specific Probabilistic Programming Language for Bayesian Data Cleaning Warning: This is a rapidly evolving research prototype.

MIT Probabilistic Computing Project 190 Dec 27, 2022